PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr2P21460_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 387aa    MW: 43022 Da    PI: 8.522
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr2P21460_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08165212455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                            +h+ +Er RR++i +++  L+ l+P +     +K   Ka +L + ++Y++sLq
  GSMUA_Achr2P21460_001 165 SHSLAERARREKISERMKMLQGLVPGC-----EKvTGKALMLDEIINYVQSLQ 212
                            8*************************9.....67699***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-16159227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.52E-9159216No hitNo description
PROSITE profilePS5088815.205161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-16161225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-6165212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-9167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MAFSYQEQHP FLLDSPYFPR SPAEMLLVPQ QGGEMANNAS SSSCFPYPYP YPSEASPVAP  60
ATDAGAYGTS APSVDSHTVC SPVASETHDV ENKRKSRDEA SLMITGELKN TKEGEIKKQR  120
RLRGGQKKTE EKKPKPNDSK GSKACLDTTG GYVHVRARRG QATDSHSLAE RARREKISER  180
MKMLQGLVPG CEKVTGKALM LDEIINYVQS LQNQVEFLSM KIASLSPILY GFNVDFGDCI  240
DQPQGLSTCA LSSRDLYVAP AVSLVRQQLM QVQHRSTLIV HIACSCPCGS VSSLQNCTEQ  300
RNLQPKKNKE KGQRQEDRER ADPCCWLLDH RVEFAYVLST VKEFYFVFTA ILVPRGCSYR  360
SLPSSSFASI LLRGRVMSCH SLKQIEH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009390436.10.0PREDICTED: transcription factor bHLH137-like
TrEMBLM0S9Y70.0M0S9Y7_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P21460_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-44bHLH family protein